using System;
using System.Collections.Generic;
using UnityEngine;
using Unity.Mathematics;
using static Unity.Mathematics.math;

[Serializable]
public abstract class Nucleus {
    public string name;

    [SerializeReference]
    public ClusterPrefab clusterPrefab;
    [SerializeReference]
    public Cluster parent;

    // protected float3 _outputValue;
    // public virtual float3 outputValue {
    //     get { return _outputValue; }
    //     set {
    //         _outputValue = value;
    //         if (this.isFiring)
    //             WhenFiring?.Invoke();
    //     }
    // }
    // public bool isFiring => length(_outputValue) > 0.5f;
    // public Action WhenFiring;

    // public virtual bool isSleeping => lengthsq(this.outputValue) == 0;
    // [NonSerialized]
    // public int stale = 1000;
    // public readonly int staleValueForSleep = 20;
    public bool trace = false;

    public abstract Nucleus ShallowCloneTo(Cluster parent);
    public abstract Nucleus Clone(ClusterPrefab prefab);

    public enum Type {
        None,
        Neuron,
        MemoryCell,
        Selector,
        Cluster,
        Pulsar,
        Receptor,
        // ReceptorArray,
        ClusterReceptor,
    }

    #region Synapses

    public Vector3 bias = Vector3.zero;

    [SerializeField]
    private List<Synapse> _synapses = new();
    public List<Synapse> synapses => _synapses;

    public Synapse AddSynapse(Nucleus sendingNucleus, float weight = 1.0f) {
        Synapse synapse = new(sendingNucleus, weight);
        this.synapses.Add(synapse);
        return synapse;
    }

    public Synapse GetSynapse(Nucleus sender) {
        foreach (Synapse synapse in this.synapses)
            if (synapse.nucleus == sender)
                return synapse;
        return null;
    }

    public void RemoveSynapse(Nucleus sendingNucleus) {
        this.synapses.RemoveAll(synapse => synapse.nucleus == sendingNucleus);
    }

    #endregion Synapses

    #region Update

    public abstract void UpdateStateIsolated();

    public virtual void UpdateNuclei() {
    }

    public virtual void SetBias(Vector3 inputValue) {
        //this.stale = 0;
        this.bias = inputValue;
        this.parent.UpdateFromNucleus(this);
    }

    public virtual void ProcessStimulus(Vector3 inputValue, int thingId = 0, string thingName = "") {
    }

    #endregion Update

}