Fix cluster receivers

Cluster.cs

@@ -434,7 +434,12 @@ public class Cluster : Nucleus {
     public virtual List<Nucleus> CollectReceivers() {
         List<Nucleus> receivers = new();
         foreach (Neuron output in this.outputs) {
-            receivers.AddRange(output.receivers);
+            foreach (Nucleus receiver in output.receivers) {
+                // Only add receivers outside this cluster
+                if (receiver.clusterPrefab != this.prefab)
+                    receivers.Add(receiver);
+                    //receivers.AddRange(output.receivers);
+            }
         }
         return receivers;
     }

ClusterReceptor.cs

@@ -8,9 +8,12 @@ using static Unity.Mathematics.math;
 public class ClusterReceptor : Cluster, IReceptor {
     public ClusterReceptor(ClusterPrefab prefab, Cluster parent, string name) : base(prefab, parent) {
         this.name = name;
-        this.array ??= new NucleusArray(this);
+        this.array = new NucleusArray(this);
+        if (this.name.IndexOf(":") < 0)
+            this.name += ": 0";
+
     }
-    public ClusterReceptor(ClusterPrefab prefabToInstantiate, ClusterPrefab parent, string name) : base(prefabToInstantiate, parent) {
+    public ClusterReceptor(ClusterPrefab prefab, ClusterPrefab parent, string name) : base(prefab, parent) {
         this.name = name;
         this.array = new NucleusArray(this);
     }

Editor/ClusterInspector.cs

@@ -16,6 +16,16 @@ public class ClusterInspector : Editor {
 
     #region Start
 
+    private void OnEnable() {
+        // Load an icon from resources or assets
+        Texture2D icon = Resources.Load<Texture2D>("ClusterIcon.png");
+
+        // Ensure the texture is valid; set the icon for the ScriptableObject
+        if (icon != null) {
+            EditorGUIUtility.SetIconForObject(target, icon);
+        }
+    }
+
     public override VisualElement CreateInspectorGUI() {
         ClusterPrefab prefab = target as ClusterPrefab;
 
@@ -265,39 +275,6 @@ public class ClusterInspector : Editor {
 
             // Draw selected Nucleus
             if (expandArray) {
-                // if (this.currentNucleus is ReceptorArray receptor) {
-                //     float maxValue = 0;
-                //     foreach (Nucleus nucleus in receptor.instances) {
-                //         float value = length(nucleus.outputValue);
-                //         if (value > maxValue)
-                //             maxValue = value;
-                //     }
-
-                //     float spacing = 400f / receptor.instances.Count();
-                //     float margin = 10 + spacing / 2;
-                //     float xMin = 150 - size;
-                //     float xMax = 150 + size;
-                //     float yMin = 10 + margin - size / 2;
-                //     float yMax = 400 - margin + size;
-                //     Vector3[] verts = new Vector3[4] {
-                //     new(xMin, yMin, 0),
-                //     new(xMax, yMin, 0),
-                //     new(xMax, yMax, 0),
-                //     new(xMin, yMax, 0)
-                // };
-                //     Handles.color = Color.black;
-                //     Handles.DrawAAConvexPolygon(verts);
-                //     int row = 0;
-                //     foreach (Nucleus nucleus in receptor.instances) {
-                //         Vector3 pos = new(150, margin + row * spacing, 0.0f);
-                //         Handles.color = Color.white;
-                //         // The selected nucleus highlight ring
-                //         Handles.DrawSolidDisc(pos, Vector3.forward, size + 2);
-                //         DrawNucleus(nucleus, pos, maxValue, size);
-                //         row++;
-                //     }
-                // }
-                //            else
                 if (this.currentNucleus is IReceptor receptor1) {
                     float maxValue = 0;
                     foreach (Nucleus nucleus in receptor1.nucleiArray) {
@@ -560,8 +537,8 @@ public class ClusterInspector : Editor {
                     Handles.Label(labelPos, nucleus.name, style);
 
             }
-            // }
 
+            // Draw Cluster ring
             if (nucleus is Cluster) {
                 Handles.color = Color.white;
                 Handles.DrawWireDisc(position, Vector3.forward, size + 10);
@@ -773,8 +750,11 @@ public class ClusterInspector : Editor {
 
                                 if (synapse.nucleus.parent != null && synapse.nucleus.parent != this.currentNucleus) {
                                     GUIStyle labelStyle = new(GUI.skin.label);
-                                    float labelWidth = labelStyle.CalcSize(new GUIContent($"{synapse.nucleus.clusterPrefab.name}.")).x;
+                                    float labelWidth = 200;
+                                    if (synapse.nucleus.clusterPrefab != null) {
+                                        labelWidth = labelStyle.CalcSize(new GUIContent($"{synapse.nucleus.clusterPrefab.name}.")).x;
                                         GUILayout.Label($"{synapse.nucleus.clusterPrefab.name}", GUILayout.Width(labelWidth));
+                                    }
                                     string[] options = synapse.nucleus.parent.clusterNuclei.Select(n => n.name).ToArray();
                                     int selectedIndex = System.Array.IndexOf(options, synapse.nucleus.name);
                                     int newIndex = EditorGUILayout.Popup(selectedIndex, options);
@@ -962,6 +942,10 @@ public class ClusterInspector : Editor {
         protected virtual void AddClusterInput(Nucleus nucleus) {
             ClusterPickerWindow.ShowPicker(brain => OnClusterPicked(nucleus, brain), "Select Cluster");
         }
+        private void OnClusterPicked(Nucleus nucleus, ClusterPrefab prefab) {
+            Cluster subclusterInstance = new(prefab, this.prefab);
+            subclusterInstance.defaultOutput.AddReceiver(nucleus);
+        }
 
         protected virtual void AddReceptorInput(Nucleus nucleus) {
             Receptor newReceptor = new(this.prefab, "New Receptor");
@@ -970,25 +954,14 @@ public class ClusterInspector : Editor {
             BuildLayers();
         }
 
-        protected virtual void AddReceptorArrayInput(Nucleus nucleus) {
-            // ReceptorArray newReceptor = new(this.prefab, "New Receptor");
-            // newReceptor.AddReceiver(nucleus);
-            // this.currentNucleus = newReceptor;
-            // BuildLayers();
-        }
-
         protected virtual void AddClusterReceptorInput(Nucleus nucleus) {
             ClusterPickerWindow.ShowPicker(prefab => OnClusterReceptorPicked(nucleus, prefab), "Select Cluster");
         }
-
-        private void OnClusterPicked(Nucleus nucleus, ClusterPrefab prefab) {
-            Cluster subclusterInstance = new(prefab, this.prefab);
-            subclusterInstance.defaultOutput.AddReceiver(nucleus);
-        }
-
         private void OnClusterReceptorPicked(Nucleus nucleus, ClusterPrefab selectedPrefab) {
             ClusterReceptor clusterInstance = new(selectedPrefab, this.prefab, "New " + selectedPrefab.name);
             clusterInstance.defaultOutput.AddReceiver(nucleus);
+            this.currentNucleus = clusterInstance;
+            BuildLayers();
         }
 
         private void EditCluster(Cluster subCluster) {
@@ -998,6 +971,7 @@ public class ClusterInspector : Editor {
             var editor = Editor.CreateEditor(subCluster.prefab);
         }
 
+        int selectedConnectNucleus = -1;
         // Connect to another nucleus in the same cluster
         protected virtual bool ConnectNucleus(ClusterPrefab cluster, Nucleus nucleusToConnect) {
             if (cluster == null)
@@ -1017,13 +991,12 @@ public class ClusterInspector : Editor {
                 .Distinct();
 
             string[] names = nucleiNames.ToArray();
-            int selectedIndex = -1;
             EditorGUILayout.BeginHorizontal();
-            selectedIndex = EditorGUILayout.Popup(selectedIndex, names);
+            selectedConnectNucleus = EditorGUILayout.Popup(selectedConnectNucleus, names);
             bool connecting = GUILayout.Button("Connect", GUILayout.Width(80));
             EditorGUILayout.EndHorizontal();
             if (connecting) {
-                Nucleus nucleus = nuclei.ElementAt(selectedIndex);
+                Nucleus nucleus = nuclei.ElementAt(selectedConnectNucleus);
                 if (nucleus is Receptor receptor)
                     receptor.AddArrayReceiver(this.currentNucleus);
                 else if (nucleus is Neuron neuron)
@@ -1033,18 +1006,6 @@ public class ClusterInspector : Editor {
 
             }
             return connecting;
-            // if (selectedIndex < 0)
-            //     return false;
-
-            // Nucleus nucleus = nuclei.ElementAt(selectedIndex);
-            // if (nucleus is Receptor receptor)
-            //     receptor.AddArrayReceiver(this.currentNucleus);
-            // else if (nucleus is Neuron neuron)
-            //     neuron.AddReceiver(this.currentNucleus);
-            // else if (nucleus is Cluster subCluster)
-            //     subCluster.defaultOutput.AddReceiver(this.currentNucleus);
-
-            // return true;
         }
 
         protected virtual void DeleteNucleus(Nucleus nucleus) {
@@ -1073,12 +1034,13 @@ public class ClusterInspector : Editor {
             BuildLayers();
         }
 
+        Nucleus.Type selectedType = Nucleus.Type.None;
         protected virtual bool AddSynapse(ClusterPrefab cluster, Nucleus nucleus) {
             if (cluster == null)
                 return false;
 
             EditorGUILayout.BeginHorizontal();
-            Nucleus.Type selectedType = (Nucleus.Type)EditorGUILayout.EnumPopup(Nucleus.Type.None);
+            selectedType = (Nucleus.Type)EditorGUILayout.EnumPopup(selectedType);
             bool connecting = GUILayout.Button("Add", GUILayout.Width(80));
             EditorGUILayout.EndHorizontal();
 

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Identity.asset

@@ -11,20 +11,25 @@ MonoBehaviour:
   m_EditorHideFlags: 0
   m_Script: {fileID: 11500000, guid: 60a957541c24c57e78018c202ebb1d9b, type: 3}
   m_Name: Identity
-  m_EditorClassIdentifier: Assembly-CSharp::Cluster
+  m_EditorClassIdentifier: Assembly-CSharp::ClusterPrefab
   nuclei:
-  - rid: 2243601383627161705
+  - rid: 2262690531574022216
   references:
     version: 2
     RefIds:
-    - rid: 2243601383627161705
+    - rid: -2
+      type: {class: , ns: , asm: }
+    - rid: 2262690531574022216
       type: {class: Neuron, ns: , asm: Assembly-CSharp}
       data:
-        _name: Output
+        name: Output
+        clusterPrefab: {fileID: 11400000}
+        parent:
+          rid: -2
+        trace: 0
+        bias: {x: 0, y: 0, z: 0}
         _synapses: []
-        _receivers: []
+        combinator: 0
-        _array:
-          rid: 2243601383627161706
         _curvePreset: 0
         curve:
           serializedVersion: 2
@@ -51,10 +56,4 @@ MonoBehaviour:
           m_PostInfinity: 2
           m_RotationOrder: 4
         curveMax: 1
-        average: 0
+        _receivers: []
-    - rid: 2243601383627161706
-      type: {class: NucleusArray, ns: , asm: Assembly-CSharp}
-      data:
-        _nuclei:
-        - rid: 2243601383627161705
-        name: Output

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